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<div class="moz-cite-prefix">On 06/27/2014 01:38 PM, Mark Maunder
wrote:<br>
<br>
see the concept traits in the template book. It is the way to deal
with this.<br>
</div>
<blockquote
cite="mid:a047eabb-31d6-491e-a8bb-d7803ea30d0a@MAIL1.lajolla.iattc.org"
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<div class="WordSection1">
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">But
that would mean the user has to know how to call the
function in this special way, which is probably asking too
much.<o:p></o:p></span></p>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Wouldn’t
simply specifying the return type as being different from
the argument work? And the compiler would work out t1 from
the definition of len?<o:p></o:p></span></p>
<p class="MsoNormal">len = vonB(age,linf,k,ro);<o:p></o:p></p>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal">template<typename t1, typename t2,
typename t3><o:p></o:p></p>
<p class="MsoNormal">t1 vonB(const t2 age, const t3 linf, const
t3 k,const t3 to)<span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p></o:p></span></p>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"><o:p> </o:p></span></p>
<div>
<div style="border:none;border-top:solid #B5C4DF
1.0pt;padding:3.0pt 0in 0in 0in">
<p class="MsoNormal"><b><span
style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span
style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">
Steve Martell [<a class="moz-txt-link-freetext" href="mailto:SteveM@iphc.int">mailto:SteveM@iphc.int</a>]
<br>
<b>Sent:</b> Friday, June 27, 2014 1:31 PM<br>
<b>To:</b> Mark Maunder<br>
<b>Cc:</b> <a class="moz-txt-link-abbreviated" href="mailto:developers@admb-project.org">developers@admb-project.org</a>; Alexandre
Aires-Da-Silva; Carolina Minte-Vera; Sean Patrick Cox<br>
<b>Subject:</b> Re: [Developers] Template functions and
documentation<o:p></o:p></span></p>
</div>
</div>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Sorry I pulled the send trigger to quickly,
the baby woke up!
<o:p></o:p></p>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<div>
<p class="MsoNormal">What I was getting at is when you have
function that returns a type that is not passed as one of
the arguments. You can still use a template function but
when you call it, you have to specify what the return type
is. eg<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<div>
<p class="MsoNormal">len =
vonB<dvar_vector>(age,linf,k,ro);<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<div>
<p class="MsoNormal">In this case you would write the template
as:<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<div>
<p class="MsoNormal">template<typename t1, typename t2,
typename t3><o:p></o:p></p>
</div>
<div>
<p class="MsoNormal">t1 vonB(const t2 age, const t3 linf,
const t3 k,const t3 to)<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<div>
<p class="MsoNormal">Steve<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><o:p> </o:p></p>
<div>
<div>
<p class="MsoNormal">On Jun 27, 2014, at 12:19 PM, Mark
Maunder <<a moz-do-not-send="true"
href="mailto:mmaunder@iattc.org">mmaunder@iattc.org</a>>
wrote:<o:p></o:p></p>
</div>
<p class="MsoNormal"><br>
<br>
<o:p></o:p></p>
<div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D">Steve,</span><o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"> </span><o:p></o:p></p>
</div>
<div>
<p class="MsoNormal">Re: In this case, the function
returns a dvector, but assigns it to a dvar_vector.
<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
<div>
<p class="MsoNormal">Yes, I recognize this. I think
this can be solved by overloading the template with
an explicit type for the return variable or making
the return variable a third type.<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
<div>
<p class="MsoNormal">Mark<o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"> </span><o:p></o:p></p>
</div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D"> </span><o:p></o:p></p>
</div>
<div>
<div style="border:none;border-top:solid #B5C4DF
1.0pt;padding:3.0pt 0in 0in 0in">
<div>
<p class="MsoNormal"><b><span
style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span
class="apple-converted-space"><span
style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> </span></span><span
style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">Steve
Martell [<a moz-do-not-send="true"
href="mailto:SteveM@iphc.int"><span
style="color:purple">mailto:SteveM@iphc.int</span></a>]<span
class="apple-converted-space"> </span><br>
<b>Sent:</b><span
class="apple-converted-space"> </span>Friday,
June 27, 2014 11:31 AM<br>
<b>To:</b><span class="apple-converted-space"> </span>Mark
Maunder<br>
<b>Cc:</b><span class="apple-converted-space"> </span><a
moz-do-not-send="true"
href="mailto:developers@admb-project.org"><span
style="color:purple">developers@admb-project.org</span></a>;
Alexandre Aires-Da-Silva; Carolina Minte-Vera;
Sean Patrick Cox<br>
<b>Subject:</b><span
class="apple-converted-space"> </span>Re:
[Developers] Template functions and
documentation</span><o:p></o:p></p>
</div>
</div>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
<div>
<div>
<p class="MsoNormal">Hi Mark, Alex, Carolina<o:p></o:p></p>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">Attached is a pretty
comprehensive book on using template classes and
template functions in C++. Its a great way to
fall asleep at night.<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">There is a lot of things you
can do with templates, but from my naive
perspective its a great way to reduce the need
for function overloading and only have a single
copy of the function to maintain. The primary
thing to remember is that the compiler will
write the actual code that gets implemented;
therefore, the function templates are usually
found in the header file (.h or .htp, or .hpp).<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">One thing to be aware of is
return types that differ from the types passed
to the function arguments. For example:<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">in the vonb.hpp file:<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">template<typename t1,
typename t2><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">t1 vonB(const t1 age, const
t2 linf, const t2, vonbk)<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">{<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">return(linf*(1.-exp(-vonbk*age)));<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">}<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">in your tpl file:<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">dvector age(1,5);<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">age.fill_seqadd(1,1);<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">dvar_vector len(1,5);<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">len = vonB(age,linf,vbk);<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">In this case, the function
returns a dvector, but assigns it to a
dvar_vector. And this will be problematic.<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">Steve<o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal">On Jun 27, 2014, at 11:05 A<o:p></o:p></p>
</div>
</div>
</div>
<div>
<div>
<div>
<div>
<p class="MsoNormal">M, Mark Maunder <<a
moz-do-not-send="true"
href="mailto:mmaunder@iattc.org"><span
style="color:purple">mmaunder@iattc.org</span></a>>
wrote:<o:p></o:p></p>
</div>
</div>
<div>
<p class="MsoNormal" style="margin-bottom:12.0pt"><o:p> </o:p></p>
</div>
<div>
<div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Hi
developers,</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">I
am in the process or putting together a
model that will be used to evaluate
several growth equations so I thought I
better try to use the ADMB project
“approved” approach for writing the
functions. Below is a template function
and documentation for the von
Bertalanffy growth equation. I would
appreciate any advice on doing this
“correctly”.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Thanks,</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">Mark</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">/**</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">\defgroup
CONTRIB Contributed libraries</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">*/</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">/**</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">\ingroup
CONTRIB</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">\defgroup
CAPAM CAPAM created functions</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">*/</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">#include
<admodel.h></span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">/**
von Bertalanffy growth equation;
constant objects.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\ingroup CAPAM</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\brief Calculate the length from a given
age based on the von Bertalanffy
equation. Written by Mark Maunder.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\param age age of individual, \f$a\f$.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\param Linf asymptotic length,
\f$L_inf\f$.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\param K growth rate, \f$K\f$.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\param t0 age at zero length, \f$t_0\f$.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
\return length predicted length of
individual.
\f$L_inf*(1-exp(-K*(a-t0)))\f$.</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
*/</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">template
<typename type1, typename type1></span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//can
have multiple types so that they are
used below in variable definitions, they
can differ between function calls, but
remain the same within a function call</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//type1
is probably a long</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//type2
is probably a dvariable (either a model
parameter (Linf K t0) or a derived
variable (length))</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//may
need a type3, which is a dvar_vector if
age and length are vectors, where type 1
will be a vector</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">type1
vonB(const type1 &age, const type2
&Linf, const type2 &K, const
type2 &t0)</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">{</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
type2 length =
Linf*(1.-mfexp(-K*(age-t0)));</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">
return (length);</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">} </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//is
length a bad word to use</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//do
we use ingroup for both groups and
subgroups in doxygen documentation</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//should
we use mfexp?</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//what
if age and length are vectors, but age
is a vector and length is a dvar_vector,
do we need to overload the type with one
with three variable types</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//I
couldn't work out how to put in the
detailed description</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif"">//The
equations did not work on my computer</span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
<div>
<div>
<p class="MsoNormal"><span
style="font-size:11.0pt;font-family:"Calibri","sans-serif""> </span><o:p></o:p></p>
</div>
</div>
</div>
<div>
<p class="MsoNormal"><span
style="font-size:13.5pt;font-family:"Helvetica","sans-serif"">_______________________________________________<br>
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href="http://lists.admb-project.org/mailman/listinfo/developers"><span
style="color:purple">http://lists.admb-project.org/mailman/listinfo/developers</span></a></span><o:p></o:p></p>
</div>
</div>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
</div>
<div>
<p class="MsoNormal"> <o:p></o:p></p>
</div>
<div class="MsoNormal" style="text-align:center"
align="center">
<hr align="center" size="3" width="100%">
</div>
<div>
<p class="MsoNormal"><span
style="font-size:7.5pt;font-family:"Arial","sans-serif";color:gray"><br>
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</div>
</div>
</div>
</div>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
<p class="MsoNormal"><o:p> </o:p></p>
<div class="MsoNormal" style="text-align:center" align="center">
<hr align="center" size="3" width="100%">
</div>
<p class="MsoNormal"><span
style="font-size:7.5pt;font-family:"Arial","sans-serif";color:gray"><br>
This internet e-mail message, and any files transmitted with
it, contains confidential, privileged information that is
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e-mail message in error, please call us at (206) 634-1838
collect if necessary) and ask to speak to the message
sender. Nothing in this e-mail or the act of transmitting
it, is to be construed as a waiver of any rights or
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</div>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<br>
<pre wrap="">_______________________________________________
Developers mailing list
<a class="moz-txt-link-abbreviated" href="mailto:Developers@admb-project.org">Developers@admb-project.org</a>
<a class="moz-txt-link-freetext" href="http://lists.admb-project.org/mailman/listinfo/developers">http://lists.admb-project.org/mailman/listinfo/developers</a>
</pre>
</blockquote>
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