[ADMB Users] Installation errors in admb-gcc-4.1.2

Kray Van Kirk fromdustreturned at gmail.com
Mon Apr 6 23:35:45 PDT 2009


Hi everyone~

I'm having repeated errors on attempts to run admb-gcc-4.1.2 on Ubuntu 8.10
and Xubuntu 8.10. The compiler is gcc-4.3.1, but I have the same results
when using gcc-4.2.4 or 4.1.2. I've also tried admb-gcc-3.4.6 with the
gcc-3.4 compiler with the same results.

Installation appears to proceed fine. Once completed, however, entering

cd $ADMB_HOME

into the terminal produces no results or change of directory.

Manually changing into the admb directory and attempting to run the 'simple'
test .tpl produces the "command not found" response for any attempted
tpl2cpp or makeadm command. I can open .tpl files in Emacs, thanks to Arni
Magnusson, but running the commands from the Emacs key bindings produces the
same results; likewise for writing the commands out in full.

During installation, and during the test run that completes the 'make'
command, I did observe the following warning regarding backwards
compaibility, but that is the only thing I can find, along with the ham5.cpp
listings below:

Estimating row 1 out of 11 for hessian
Estimating row 2 out of 11 for hessian
Estimating row 3 out of 11 for hessian
Estimating row 4 out of 11 for hessian
Estimating row 5 out of 11 for hessian
Estimating row 6 out of 11 for hessian
Estimating row 7 out of 11 for hessian
Estimating row 8 out of 11 for hessian
Estimating row 9 out of 11 for hessian
Estimating row 10 out of 11 for hessian
Estimating row 11 out of 11 for hessian
cd /home/arctos/admb/examples/admb/buscycle;makeadm ham5;./ham5
In file included from /usr/include/c++/4.3/backward/strstream:51,
                 from //home/arctos/admb/include/fvar.hpp:446,
                 from ham5.cpp:1:
/usr/include/c++/4.3/backward/backward_warning.h:33:2: warning: #warning
This file includes at least one deprecated or antiquated header which may be
removed without further notice at a future date. Please use a non-deprecated
interface with equivalent functionality instead. For a listing of
replacement headers and interfaces, consult the file backward_warning.h. To
disable this warning use -Wno-deprecated.
In file included from ham5.cpp:1:
//home/arctos/admb/include/fvar.hpp:4084: warning: extra qualification
‘d3_array::’ on member ‘operator=’
//home/arctos/admb/include/fvar.hpp:4085: warning: extra qualification
‘d3_array::’ on member ‘operator=’
//home/arctos/admb/include/fvar.hpp:4257: warning: extra qualification
‘i3_array::’ on member ‘operator=’
//home/arctos/admb/include/fvar.hpp:4258: warning: extra qualification
‘i3_array::’ on member ‘operator=’
//home/arctos/admb/include/fvar.hpp:4282: warning: extra qualification
‘dvar3_array::’ on member ‘dvar3_array’
//home/arctos/admb/include/fvar.hpp:5106: warning: extra qualification
‘d4_array::’ on member ‘d4_array’
//home/arctos/admb/include/fvar.hpp:5271: warning: extra qualification
‘dvar4_array::’ on member ‘dvar4_array’
//home/arctos/admb/include/fvar.hpp:6284: warning: extra qualification
‘dvar6_array::’ on member ‘operator/=’
//home/arctos/admb/include/fvar.hpp:6285: warning: extra qualification
‘dvar6_array::’ on member ‘operator/=’
//home/arctos/admb/include/fvar.hpp:6583: warning: extra qualification
‘dvar7_array::’ on member ‘operator/=’
//home/arctos/admb/include/fvar.hpp:6584: warning: extra qualification
‘dvar7_array::’ on member ‘operator/=’
In file included from //home/arctos/admb/include/fvar.hpp:7481,
                 from ham5.cpp:1:
//home/arctos/admb/include/adstring.hpp:255: warning: extra qualification
‘adstring_array::’ on member ‘operator+=’
//home/arctos/admb/include/adstring.hpp:256: warning: extra qualification
‘adstring_array::’ on member ‘append_distinct’
In file included from ham5.cpp:9:
//home/arctos/admb/include/admodel.h:1574: warning: extra qualification
‘function_minimizer::’ on member ‘get_bigS’
//home/arctos/admb/include/admodel.h:1652: warning: extra qualification
‘function_minimizer::’ on member ‘trust_region_update’
//home/arctos/admb/include/admodel.h:1702: warning: extra qualification
‘function_minimizer::’ on member ‘hess_routine_random_effects’
//home/arctos/admb/include/admodel.h:1706: warning: extra qualification
‘function_minimizer::’ on member ‘hess_routine_noparallel_random_effects’
//home/arctos/admb/include/admodel.h:2257: warning: extra qualification
‘param_init_bounded_matrix_vector::’ on member ‘allocate’
//home/arctos/admb/include/admodel.h:2262: warning: extra qualification
‘param_init_bounded_matrix_vector::’ on member ‘allocate’
^Cmake: *** [ham5] Interrupt

Thank you!

Kray
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