[ADMB Users] Accounting for autocorrelation in glmmADMB using R

[H. Skaug]

Hi,

It is not possible within glmmADMB, but if you are willing to start using ADMB
then it is easy. I attach an AR1 model with negative binomial response.
(I agree that the code may look confusing, but my point is that there
are only a few lines of code that does the job so it cannot possibly
be that difficult :-)
Here are pointers to spatial models:

http://admb-project.org/examples/spatial-models/glmm2019s-on-large-spatial-grids
http://admb-project.org/examples/spatial-models/glmm-with-spatial-structure-described-in-terms-of-covariance-function

By working directly with ADMB you will be able to get more help from this list.
Also there exist packages for calling ADMB programs from R.

Hans


On Tue, Apr 12, 2011 at 8:08 PM, Holly G <hollygoy at hotmail.com> wrote:
> Hi,
> Do any users of glmmADMB in R recommend a straight-forward way of accounting
> for autocorrelation (spatial or AR1 structure)?
> Thank you,
> Holly
>
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> Users mailing list
> Users at admb-project.org
> http://lists.admb-project.org/mailman/listinfo/users
>
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