[ADMB Users] Fwd: lgam in 10.0

Mollie Brooks mbrooks at ufl.edu
Sun May 15 13:54:08 PDT 2011


> These steps (below, for Unix with g++) seem to have worked perfectly for the compile on my mac. The problem was that I got distracted during the verify and forgot step 6. Sorry for wasting your time.
> There was no need to edit ./.bashrc and no need to restart the terminal before using it.

After commenting out lines 309, 314, and 943 to 1050, I was able to compile the the code and attempted to run the model . However, it appears that the function isn't defined for my variable type

*** Parsing: tpl2cpp firdbhfec

*** Compiling: CXXFLAGS="-m64" adcomp firdbhfec
g++ -c -O3 -Wno-deprecated  -DOPT_LIB -D__GNUDOS__ -Dlinux -DUSE_LAPLACE -fpermissive -I. -I/usr/local/admb/include -m64 firdbhfec.cpp
firdbhfec.cpp: In member function ‘virtual void model_parameters::userfunction()’:
firdbhfec.cpp:35: error: cannot convert ‘prevariable’ to ‘double’ for argument ‘2’ to ‘double log_density_negbinomial(double, double, double)’

Error: Failed to build executable.

> thanks,
> Mollie
> 
> 
> Begin forwarded message:
> 
>> From: Steve Martell <martell.steve at gmail.com>
>> Date: 15 May, 2011 2:47:32 PM EDT
>> To: Mollie Brooks <mbrooks at ufl.edu>
>> Subject: Re: [ADMB Users] lgam in 10.0
>> 
>> Hi Mollie,
>> I compile and install the source code all the time using the following steps.  Sounds to me like your missing step 6.  I don't edit the .bashrc file.  Mine has nothing in it.
>> 
>> S.
>> 
>> Installation from Source Code
>> =============================
>> Below are procedures for installing ADMB from source code.
>> 
>> Unix and GNU g++
>> ----------------
>> 1. Extract source distribution
>>    
>>    $ unzip admb-10.0.zip
>> 
>> 2. Change to distribution directory
>> 
>>    $ cd admb-10.0
>> 
>> 3. Configure the build files for 32-bit
>> 
>>    $ ./configure
>> 
>>    or configure the build files for 64-bit.
>> 
>>    $ ./configure BUILD_64BIT=yes
>> 
>> 4. Build libraries 
>>   
>>    $ make
>> 
>> 5. [Optional] Test build by running examples
>> 
>>    $ make verify
>> 
>> 6. Install libraries to default location /usr/local.
>> 
>>    $ make install
>> 

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