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Kray,<br>
I assume you are following the instructions here:
<a class="moz-txt-link-freetext" href="http://admb-project.org/documentation/admb-installation-linux">http://admb-project.org/documentation/admb-installation-linux</a><br>
If you've entered the suggested commands,<br>
<blockquote><tt></tt><tt>cd ~/admb</tt><br>
<tt></tt><tt> export ADMB_HOME=~/admb</tt><br>
<tt></tt><tt> export PATH=$ADMB_HOME/bin:$PATH</tt><br>
</blockquote>
and find that <br>
<tt> cd $ADMB_HOME</tt><br>
does not work, then I don't believe that's an ADMB-specific issue. <br>
<br>
What happens when you type<br>
<tt> echo $PATH<br>
</tt>or<tt><br>
echo $ADMB_HOME<br>
?<br>
<br>
</tt>Could the problem be related to the directory name being case
sensitive in linux? <br>
<br>
Also, maybe the installation instructions could also note that the
"deprecated or antiquated header" and "extra qualification" warnings
are to be expected so that they don't scare people away (at least until
the day comes when the warnings themselves can be made to go away).<br>
<br>
-Ian<br>
<br>
<br>
<br>
<br>
Kray Van Kirk wrote:
<blockquote
cite="mid:a300035c0904062335i596ae572kcc2225e67dbee325@mail.gmail.com"
type="cite">Hi everyone~<br>
<br>
I'm having repeated errors on attempts to run admb-gcc-4.1.2 on Ubuntu
8.10 and Xubuntu 8.10. The compiler is gcc-4.3.1, but I have the same
results when using gcc-4.2.4 or 4.1.2. I've also tried admb-gcc-3.4.6
with the gcc-3.4 compiler with the same results.<br>
<br>
Installation appears to proceed fine. Once completed, however, entering<br>
<br>
cd $ADMB_HOME <br>
<br>
into the terminal produces no results or change of directory.<br>
<br>
Manually changing into the admb directory and attempting to run the
'simple' test .tpl produces the "command not found" response for any
attempted tpl2cpp or makeadm command. I can open .tpl files in Emacs,
thanks to Arni Magnusson, but running the commands from the Emacs key
bindings produces the same results; likewise for writing the commands
out in full.<br>
<br>
During installation, and during the test run that completes the 'make'
command, I did observe the following warning regarding backwards
compaibility, but that is the only thing I can find, along with the
ham5.cpp listings below:<br>
<br>
Estimating row 1 out of 11 for hessian<br>
Estimating row 2 out of 11 for hessian<br>
Estimating row 3 out of 11 for hessian<br>
Estimating row 4 out of 11 for hessian<br>
Estimating row 5 out of 11 for hessian<br>
Estimating row 6 out of 11 for hessian<br>
Estimating row 7 out of 11 for hessian<br>
Estimating row 8 out of 11 for hessian<br>
Estimating row 9 out of 11 for hessian<br>
Estimating row 10 out of 11 for hessian<br>
Estimating row 11 out of 11 for hessian<br>
cd /home/arctos/admb/examples/admb/buscycle;makeadm ham5;./ham5<br>
In file included from /usr/include/c++/4.3/backward/strstream:51,<br>
from //home/arctos/admb/include/fvar.hpp:446,<br>
from ham5.cpp:1:<br>
/usr/include/c++/4.3/backward/backward_warning.h:33:2: warning:
#warning This file includes at least one deprecated or antiquated
header which may be removed without further notice at a future date.
Please use a non-deprecated interface with equivalent functionality
instead. For a listing of replacement headers and interfaces, consult
the file backward_warning.h. To disable this warning use
-Wno-deprecated.<br>
In file included from ham5.cpp:1:<br>
//home/arctos/admb/include/fvar.hpp:4084: warning: extra qualification
‘d3_array::’ on member ‘operator=’<br>
//home/arctos/admb/include/fvar.hpp:4085: warning: extra qualification
‘d3_array::’ on member ‘operator=’<br>
//home/arctos/admb/include/fvar.hpp:4257: warning: extra qualification
‘i3_array::’ on member ‘operator=’<br>
//home/arctos/admb/include/fvar.hpp:4258: warning: extra qualification
‘i3_array::’ on member ‘operator=’<br>
//home/arctos/admb/include/fvar.hpp:4282: warning: extra qualification
‘dvar3_array::’ on member ‘dvar3_array’<br>
//home/arctos/admb/include/fvar.hpp:5106: warning: extra qualification
‘d4_array::’ on member ‘d4_array’<br>
//home/arctos/admb/include/fvar.hpp:5271: warning: extra qualification
‘dvar4_array::’ on member ‘dvar4_array’<br>
//home/arctos/admb/include/fvar.hpp:6284: warning: extra qualification
‘dvar6_array::’ on member ‘operator/=’<br>
//home/arctos/admb/include/fvar.hpp:6285: warning: extra qualification
‘dvar6_array::’ on member ‘operator/=’<br>
//home/arctos/admb/include/fvar.hpp:6583: warning: extra qualification
‘dvar7_array::’ on member ‘operator/=’<br>
//home/arctos/admb/include/fvar.hpp:6584: warning: extra qualification
‘dvar7_array::’ on member ‘operator/=’<br>
In file included from //home/arctos/admb/include/fvar.hpp:7481,<br>
from ham5.cpp:1:<br>
//home/arctos/admb/include/adstring.hpp:255: warning: extra
qualification ‘adstring_array::’ on member ‘operator+=’<br>
//home/arctos/admb/include/adstring.hpp:256: warning: extra
qualification ‘adstring_array::’ on member ‘append_distinct’<br>
In file included from ham5.cpp:9:<br>
//home/arctos/admb/include/admodel.h:1574: warning: extra qualification
‘function_minimizer::’ on member ‘get_bigS’<br>
//home/arctos/admb/include/admodel.h:1652: warning: extra qualification
‘function_minimizer::’ on member ‘trust_region_update’<br>
//home/arctos/admb/include/admodel.h:1702: warning: extra qualification
‘function_minimizer::’ on member ‘hess_routine_random_effects’<br>
//home/arctos/admb/include/admodel.h:1706: warning: extra qualification
‘function_minimizer::’ on member
‘hess_routine_noparallel_random_effects’<br>
//home/arctos/admb/include/admodel.h:2257: warning: extra qualification
‘param_init_bounded_matrix_vector::’ on member ‘allocate’<br>
//home/arctos/admb/include/admodel.h:2262: warning: extra qualification
‘param_init_bounded_matrix_vector::’ on member ‘allocate’<br>
^Cmake: *** [ham5] Interrupt<br>
<br>
Thank you!<br>
<br>
Kray<br>
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