<div dir="ltr">Sorry, my bad.</div><div class="gmail_extra"><br><br><div class="gmail_quote">On Thu, Nov 14, 2013 at 4:20 PM, dave fournier <span dir="ltr"><<a href="mailto:davef@otter-rsch.com" target="_blank">davef@otter-rsch.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div bgcolor="#FFFFFF" text="#000000">
<div>On 13-11-14 04:31 PM, Leo Polansky
wrote:<br>
<br>
my version of the code looks like<br>
<br>
void function_minimizer::trust_region_update(int nvar,int _crit,<br>
independent_variables& x,const dvector& _g,const
double& _f)<br>
{<br>
double & f= (double&)_f;<br>
dvector & g= (dvector&)_g;<br>
int unvar=1;
// unvar defined here<br>
fmm fmc(nvar);<br>
if (random_effects_flag)<br>
{<br>
initial_params::set_active_only_random_effects();<br>
//cout << nvar << endl;<br>
unvar=initial_params::nvarcalc(); //unvar used
here<br>
initial_params::restore_start_phase();<br>
<br>
So I have no idea why it thinks that unvar is undefined here.<br>
<br>
What does your version of the code look like?<br>
<br>
</div>
<blockquote type="cite">
<div dir="ltr">Dear ADMB Developers,
<div>Thank you for making this software; I'm looking forward to
using it to move beyond shoehorning my problems into things
solvable in R. I attempted to install admb on Mac with
Mavericks (OS X 10.9) following the instructions from Johnoel
and Steve on earlier posting on this thread, i.e.</div><div class="im">
<div style="font-family:arial,sans-serif;font-size:13px"><br>
</div>
<div style="font-family:arial,sans-serif;font-size:13px">$ svn
checkout <a href="http://www.admb-project.org/svn/trunk" target="_blank">http://www.admb-project.org/svn/trunk</a> admb-trunk</div>
<div style="font-family:arial,sans-serif;font-size:13px">$ cd
admb-trunk</div>
<div><span style="font-family:arial,sans-serif;font-size:13px">$
make</span></div>
<div><br>
</div>
</div><div>However, besides the occasional warning, this did not
work. In the end the make command produced</div>
<div><br>
</div>
<div>
<p style="margin:0px;font-size:11px;font-family:Menlo"><b>df1b2-separable/f1b2trst.cpp:31:5:
</b><span style="color:rgb(195,55,32)"><b>error: </b></span><b>use
of undeclared identifier 'unvar'; did you mean 'nvar'?</b></p>
<p style="margin:0px;font-size:11px;font-family:Menlo">
unvar=initial_params::nvarcalc(); // get the number of
active</p>
<p style="margin:0px;font-size:11px;font-family:Menlo;color:rgb(52,189,38)"><b>
^~~~~</b></p>
<p style="margin:0px;font-size:11px;font-family:Menlo;color:rgb(52,189,38)">
nvar</p>
<p style="margin:0px;font-size:11px;font-family:Menlo"><b>df1b2-separable/f1b2trst.cpp:21:50:
note: </b>'nvar' declared here</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">void
function_minimizer::trust_region_update(int nvar,int _crit,</p>
<p style="margin:0px;font-size:11px;font-family:Menlo;color:rgb(52,189,38)"><b>
^</b></p>
<p style="margin:0px;font-size:11px;font-family:Menlo">1 error
generated.</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">make[1]:
***
[../build/objects/dist/optlp-df1b2-separable-f1b2trst.obj]
Error 1</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">make:
*** [c++-all] Error 2</p>
<p style="margin:0px;font-size:11px;font-family:Menlo"><br>
</p>
<p style="margin:0px">It appears I didn't get as far as
Alejandro who seemed to get it to the point of being able to
have an 'admb' command available. I'm not sure how to
proceed, what to try, etc. Trying to download admb directly
from the ADMB webpage and following the unix installation
instructions did not work. Also, should I be nervous about
Dave's earlier comment that an unsafe version was installed
in some earlier cases? Any suggestions would be appreciated.
In case it's helpful here is the C compiler version info.</p>
</div>
<div><br>
</div>
<div>
<p style="margin:0px;font-size:11px;font-family:Menlo">gcc -v</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Configured
with:
--prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/usr/include/c++/4.2.1</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Apple
LLVM version 5.0 (clang-500.2.76) (based on LLVM 3.3svn)</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Target:
x86_64-apple-darwin13.0.0</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Thread
model: posix</p>
<p style="margin:0px;font-size:11px;font-family:Menlo"><br>
</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">g++ -v</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">
Configured with:
--prefix=/Applications/Xcode.app/Contents/Developer/usr
--with-gxx-include-dir=/usr/include/c++/4.2.1</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Apple
LLVM version 5.0 (clang-500.2.76) (based on LLVM 3.3svn)</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Target:
x86_64-apple-darwin13.0.0</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">
</p>
<p style="margin:0px;font-size:11px;font-family:Menlo">Thread
model: posix</p>
<p style="margin:0px;font-size:11px;font-family:Menlo"><br>
</p>
</div>
<div><br>
</div>
</div><div><div class="h5">
<div class="gmail_extra"><br>
<br>
<div class="gmail_quote">
On Mon, Nov 11, 2013 at 9:03 AM, dave fournier <span dir="ltr"><<a href="mailto:davef@otter-rsch.com" target="_blank">davef@otter-rsch.com</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Your first version appears to make the optimized version of
the<br>
program which is intended to run fast and does not do bounds
checks.
<div><br>
<br>
*** tpl2cpp mixsan<br>
<br>
*** adcomp mixsan<br>
g++ -c -O3 -Wno-deprecated -D__GNUDOS__ -Dlinux -DOPT_LIB
-DUSE_LAPLACE -fpermissive -I.
-I"/Applications/ADMB/ADMB-11
Terminal.app/Contents/admb-11"/include -<br>
<br>
b<br>
<br>
<br>
</div>
Your second version
<div><br>
<br>
*** tpl2cpp -bounds mixsan<br>
<br>
*** adcomp -s mixsan.cpp<br>
c++ -c -O3 -D__GNUDOS__ -Dlinux -DSAFE_ALL -DUSE_LAPLACE
-I. -I"/Users/alejandro/admb-trunk/build/dist"/include
-I"/Users/alejandro/admb-trunk/build/dist"/contrib/include
mixsan.cpp<br>
<br>
<br>
</div>
makes the slower "safe" version of the program which does
bounds checking. You should always do this first<br>
to make sure that a new program does not walk out of any
arrays.<br>
<br>
So it appears that your program never really worked, but the
first version did not report the problem.
<div>
<div><br>
<br>
<br>
<br>
<br>
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</blockquote>
</div>
<br>
</div>
</div></div></blockquote>
<br>
</div>
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<br></blockquote></div><br></div>