[ADMB Users] running admb from R using system()

Ian Fiske ianfiske at gmail.com
Mon May 31 01:54:53 PDT 2010


Hi Beni,

Could you provide more details about exactly how R crashes such as error
message, screen description, etc?  Do you see any ADMB output?  Is your RAM
filling up?  Also, what version of R and Windows are you using?

I have been doing this same thing in Linux (Ubuntu 9.10) for a while without
problems, so I'm wondering if this is Windows-related.

On a side note, I didn't even know that windows knew of the "." syntax --
seems unixy.

Best,
Ian

-- 
Ian Fiske
PhD Candidate
Department of Statistics
North Carolina State University
ianfiske at gmail.com
813.944.8108

##########################
> #setting the working directory
> setwd("Documents and Settings\\Beni User\\Desktop\\Transfer\\Model
> Fournier\\admb models\\simulated data\\stochastic\\pooled age classes")
>
> #building the model -> this works fine
> system('makeadm stocpool')
>
> #running the model -> makes R crash
> system('stoc.exe')
> ###########################
> #or directly like this:
> setwd("Documents and Settings\\Beni User\\Desktop\\Transfer\\Model
> Fournier\\admb models\\simulated data\\stochastic\\pooled age classes")
> system("./stocpool") -> makes R crash right away
>
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