[ADMB Users] Official ADMB journal publication

kvk fromdustreturned at gmail.com
Thu Nov 10 12:39:54 PST 2011


Hi Anders~

That's perfect - thanks! I need to download an updated manual; I think
I have something like 7.1...

Thank you!

On Nov 10, 2:24 am, and... at nielsensweb.org wrote:
> Hi Kray,
>
> I am not sure I completely understand your question.
>
> There is some description of this in the manual.
>
> Basically you have to declare eg:
>
>    likeprof_number myOutput
>
> in the parameters section, and then assign that to
> something in the procedure section.
>
>    myOutput= ...
>
> I have a few examples in an old presentation, which also
> includes a simple way to read those files into R. You can
> find it here:
>
>    http://nielsensweb.org/un.pdf
>
> Cheers,
>
> Anders.
>
>
>
>
>
>
>
>
>
> On Wed, 9 Nov 2011 13:05:26 -0800 (PST), kvk wrote:
> > This is a very helpful paper! Thanks!
>
> > I noticed in section 2.3.1 and the discussion of profile likelihood
> > the sentence:
>
> > "The profile likelihood curve l(phi) is a graphical display of the
> > information contained in the data about the interest parameters."
>
> > Is this a new output file designed for graphical analysis? Or does
> > there need to be formal output statement written to define and
> > extract
> > it?
>
> > Thanks!!
>
> > Kray
>
> > On Oct 26, 10:22 am, Mark Maunder <mmaun... at iattc.org> wrote:
> >> Dear ADMB users,
>
> >> A journal publication describing ADMB has just been published and is
> >> freely available through open access
> >> athttp://www.tandfonline.com/doi/abs/10.1080/10556788.2011.597854
>
> >> It has not yet been assigned a journal issue or page numbers, but
> >> this will be the recommended citation for ADMB for any publications
> >> using ADMB.
>
> >> Regards,
>
> >> Mark
>
> >> Mark Maunder
>
> >> IATTC fall workshop: Using Oceanography for Fisheries Stock
> >> Assessment and Management
> >> 11-14 October 2011, La Jolla,
> >> CAhttp://www.fisheriesstockassessment.com/TikiWiki/tiki-index.php?page=...
>
> >> Head of the Stock Assessment Program
> >> Inter-American  Tropical Tuna Commission
>
> >> President
> >> ADMB Foundation
>
> >> 8604 La Jolla Shores Drive
> >> La Jolla, CA, 92037-1508, USA
>
> >> Tel: (858) 546-7027
> >> Fax: (858) 546-7133
>
> >> mmaun... at iattc.org<mailto:mmaun... at iattc.org>http://www.fisheriesstockassessment.com/TikiWiki/tiki-index.php?page=...
>
> >> Visit the AD Model Builder project at
> >>  http://admb-project.org/
>
> >> See the following website for information on fisheries stock
> >> assessmenthttp://www.fisheriesstockassessment.com/
>
> >> _______________________________________________
> >> Users mailing list
>
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