[ADMB Users] installing admb and bringing it into R

[Saang-Yoon]

Hi, Mari.
PBSadmb is also an excellent package for using ADMB inside R.
Saang-Yoon

On Oct 14, 2:26 pm, Ian Taylor <Ian.Tay... at noaa.gov> wrote:
> Hi Mari,
> Note that the command
>         cd admb-10.0\src6
> will change directory relative to whatever your current directory is.
> It may work better if you modify the command to be
>         cd c:\admb-10.0\src6
>
> However, the larger question is why bother with all the steps of trying to
> compile ADMB from the source distribution (note that there are many steps
> after the one you're stuck on). It is much easier to download the MinGW or
> Borland installer, or better yet, the ADMB-IDE, all of which are athttp://admb-project.org/downloads/
> -Ian
>
>
>
>
>
> > -----Original Message-----
> > From: users-boun... at admb-project.org [mailto:users-bounces at admb-
> > project.org] On Behalf Of Mari Jaramillo
> > Sent: Friday, October 14, 2011 12:54 PM
> > To: Ben Bolker
> > Cc: us... at admb-project.org
> > Subject: Re: [ADMB Users] installing admb and bringing it into R
>
> > I followed you advice but it still gives me the same message: the system
> > cannot find path.
>
> > Any other ideas as to what I might be doing wrong?
>
> > Thanks for the help,
> > Mari
>
> > --------------------------------------------------
> > From: "Ben Bolker" <bbol... at gmail.com>
> > Sent: Friday, October 14, 2011 10:46 AM
> > To: "Mari Jaramillo" <mari... at live.com>; <us... at admb-project.org>
> > Subject: Re: [ADMB Users] installing admb and bringing it into R
>
> > > On 10/14/2011 03:37 PM, Mari Jaramillo wrote:
> > >> Hi, appreciate the quick response!
>
> > >  [forwarding back to the us... at admb-project.org list so others can
> > > participate]
>
> > >> Ok so, I extracted the source distribution (in download folder), I
> > >> opened Command  Prompt and set BCC55_HOME variable to location of
> > >> BCC55 folder > set BCC55_HOME=c:\Borland\BCC554. I set BCC5_HOME to
> > >> system PATH  > set PATH=c:\Borland\BCC55\Bin;%PATH%5.
> > >> But then when I try to change the directory to "src" folder >cd
> > >> admb-10.0\src6
> > >> it gives me the following message: The system cannot find the path
> > >> specified
>
> > > If you extracted the source distribution in the download folder then
> > > its location would be something like
> > > c:\users\yourname\Downloads\admb-10.0 ... I'm not sure what the
> > README
> > > says, but I would try moving the whole source directory to
> > > c:\admb-10.0
>
> > >  Others may be able to be more helpful.
>
> > >  Ben Bolker
>
> > >> Is there something that I am doing wrong?
> > >> And I use Windows XP.
>
> > >> Million thanks!
> > >> Mari
>
> > >> --------------------------------------------------
> > >> From: "Ben Bolker" <bbol... at gmail.com>
> > >> Sent: Friday, October 14, 2011 9:44 AM
> > >> To: "Mari Jaramillo" <mari... at live.com>
> > >> Cc: <us... at admb-project.org>
> > >> Subject: Re: [ADMB Users] installing admb and bringing it into R
>
> > >>> On 10/14/2011 02:33 PM, Mari Jaramillo wrote:
> > >>>> I have questions about installing and using admb in R. I tried
> > >>>> using the commands in the readme file with both WinGW and Borland
> > >>>> 5.5 when downloading the source code and it doesn't work. Some of
> > >>>> them are not accepted by the command prompt. And if I download the
> > >>>> dedicated version for WinGW or Borland 5.5 how do I bring it into
> > >>>> R? I appreciate any help,
>
> > >>>  "Doesn't work; some of them are not accepted by the command
> > prompt"
> > >>> is probably too vague for us to give useful feedback/help. Please
> > >>> tell us
> > >>> *exactly* what you tried and *exactly* what went wrong (e.g., cut
> > >>> and paste error messages.)
>
> > >>>  I assume you're on Windows; which version (probably doesn't matter
> > >>> but might be helpful)?
>
> > >>>  It is best to get examples running from the command line first,
> > >>> before you try to integrate with R.  Integrating with R can be done
> > >>> in various ways, including the R2admb package.  Install R2admb from
> > >>> R forge
> > >>> (install.packages("R2admb",repos="http://r-forge.r-project.org");
> > >>> library("R2admb"); vignette("R2admb")) and go from there ...
>
> > >>> Mari Jaramillo Ms Student University of Missouri
> > >>>> - St Louis Biology Dept., 223 Research Bldg. One University Blvd. St.
> > >>>> Louis, MO 63121-4400
>
> > >>>> _______________________________________________ Users
> > mailing list
> > >>>> Us... at admb-project.org
> > >>>>http://lists.admb-project.org/mailman/listinfo/users
>
> > _______________________________________________
> > Users mailing list
> > Us... at admb-project.org
> >http://lists.admb-project.org/mailman/listinfo/users
>
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