[ADMB Users] plotting with library glmmADMB

Carolina Soto Navarro carolina.soto at ebd.csic.es
Mon Nov 19 08:44:50 PST 2012


Hello,

I´m trying to plot the partial effects of the below model built with the 
glmmadmb function....

M4 <- glmmadmb(MELONCILLO~VERALOG + AGUALOG
                VERALOG + ICONLOG
                + ALTOLOG + MATORRALLOG
                + PMATORRALLOG
                + ICONLOG + IT
                + IL + MELONCILLOAUTOC
                +  HUM + offset(LOGDIST)
                + (1|CUAD) + (1|OBSCEN),
                data=locs,
                family="nbinom")

I tried to use the library /effects/ (for example: plot(effect("IL", 
M4))  but got the error:"Error en plot(effect("IL", M4)) : error in 
evaluating the argument 'x' in selecting a method for function 'plot': 
Error en UseMethod("effect", mod) : no applicable method for 'effect' 
applied to an object of class "glmmadmb".

Anny suggestion about which library could be useful for plotting purposes?

Thanks a lot for your help.

Carolina


-- 
Carolina Ángela Soto Navarro
PhD student JAE-Pre Fellow
Department of Conservation Biology
Estación Biológica de Doñana (CSIC)
C/Américo Vespucio s/n
41092 Sevilla Spain
Tel. 0034  954466700
carolina.soto at ebd.csic.es
http://www.ebd.csic.es/carnivoros/personal/soto/

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