[ADMB Users] fixed memory leak (hopefully)

dave fournier davef at otter-rsch.com
Tue Oct 28 07:42:44 PDT 2014


On 10/28/2014 01:58 AM, maren wrote:

Good to hear. I hope we can get glmmadmb rebuilt with these changes.

     Dave


> Hi Dave,
>
> I just want to let you know that the new version of glmmADMB is 
> performing well in a long MCMC run. The allocated memory doesn’t reach 
> such large sizes anymore.
>
> Thanks again for fixing the memory leaks!
>
> Best wishes,
>
> Maren
>
>
>
>
> Am 26.10.2014 21:41, schrieb dave fournier:
>> On 10/24/2014 04:29 AM, maren wrote:
>>
>> Hi,
>>
>>
>> This should be much better.
>>
>>     Dave
>>
>>
>>> Hi Dave,
>>>
>>> I have been running my model again for roughly 24 hours with the 
>>> updated version of glmmADMB that you sent to me. The allocated 
>>> memory might be a bit smaller but reached again already 5.5 GB. 
>>> However, I started 10000 iterations this time and not 2000 and 
>>> cannot tell how far the MCMC ran up to now (can I check that 
>>> somehow?). Therefore, I am wondering if there might be another 
>>> memory leak. Or do I, for example, also need to update the package 
>>> R2admb in case the problem was ADMB related?
>>>
>>> Best wishes,
>>>
>>> Maren
>>>
>>>
>>>
>>>
>>> Am 22.10.2014 19:10, schrieb dave fournier:
>>>> Hi,
>>>>
>>>> Here is a 64 bit windows version of glmmadmb with the fix I put in. 
>>>> YOu should unzip it
>>>> and replace the glmmadmb.exe in your R dist and give it a try.
>>>>
>>>>       Cheers,
>>>>
>>>>       Dave
>>>
>>
>

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