[Developers] ADMB availability

John Sibert sibert at hawaii.edu
Thu Dec 10 12:06:58 PST 2009


We are in the process of revising the manuals. I fix it after we receive 
the revisions from the LaTeX consultant.

Mark Maunder wrote:
> The availability of ADMB should be updated in the manual.
>
> "16.8 How to order AD Model Builder"
>
> Mark
>
>
> -----Original Message-----
> From: developers-bounces at admb-project.org
> [mailto:developers-bounces at admb-project.org] On Behalf Of John Sibert
> Sent: Wednesday, December 09, 2009 8:11 AM
> To: Hans Julius Skaug
> Cc: developers at admb-project.org
> Subject: Re: [Developers] Website: example collection
>
> Hi Hans -
>
> Your proposed categories seem like an excellent and practical way to 
> start. I'm sure adjustments can be made as this project proceeds.
>
> As I understand the change in the website, most of the changes will 
> occur in the css files, and existing content will be simply reformatted.
>
> The text on the "home" page will be redrafted, however.
>
> Cheers,
> John
>
> Hans Julius Skaug wrote:
>   
>> Hi,
>>  
>> I will try to populate Examples rather quickly, altthough only with
>>     
> categories
>   
>> in the beginning. What about the following categories?
>>  
>> Scientific discipline
>>   -> Ecology
>>   -> Economics/econometrics
>>   -> Fisheries 
>>   -> Genetics/Bioinformatics
>>   -> Medical/Biometrics 
>>   -> Sociology
>> Simple examples
>> Mark-recapcture
>> Growth models
>> Stock assessment
>> Spatial models
>> State space models
>> GLM (Generalized linear models)
>> GLMM (Generalized linear mixed models)
>> Survivial analysis
>> Differential equations
>> Categorial data
>>  
>> Any other topics?
>>  
>> John: will existing pages be re-styled automatically, or is it effient
>>     
> to wait
>   
>> until the new look for the webpages is in place?
>>  
>> Hans
>>
>>  
>> ________________________________
>>
>> Fra: John Sibert [mailto:sibert at hawaii.edu]
>> Sendt: ti 08.12.2009 18:05
>> Til: Hans Julius Skaug
>> Kopi: developers at admb-project.org
>> Emne: Re: [Developers] Website: example collection
>>
>>
>>
>> Hi Hans,
>> The Examples tab is now on-line.
>>
>> A agree with you about creating a model taxonomy. We should think
>>     
> about
>   
>> ways to feature models on our site that have  capabilities not
>>     
> otherwise
>   
>> available in the other packages. You seem to have proposed a
>> two-dimensional taxonmy. Your first dimension is general classes of
>> application and your second is ADMB features. We might consider adding
>> scientific discipline to the first axis. New potential users may
>>     
> stumble
>   
>> into the site and wonder "What can this do for me as an ecologist (or
>> sociologist, ...)?"
>>
>> Thanks for taking this on.
>> John
>>
>> Hans Julius Skaug wrote:
>>   
>>     
>>> John,
>>>
>>> Yes, I will take a lead on this, but moving all the examples
>>> may take time. And yes, it is good to take
>>> this as a part of the bigger descussion about web site design.
>>>
>>> I am in favor of placing the examples on a top level,
>>> but a second level is also OK. An equally important
>>> question is how to create a model taxonomy. My suggestion is
>>> to use fairly wide topics, like differential equations, growth
>>>       
> curves, etc.
>   
>>> I imagine 10 - 20 topics on this level. The sublevels are harder
>>> to imagine.
>>>
>>> The alternative is to create topics that are closer
>>> to the inner working of ADMB: funnels, random effects,
>>> mcmc etc. I my opinion that is more natural in the user manual,
>>> but not so much at the website.
>>>
>>> Suggestion: use the former taxonomy, and lest every posted model have
>>> a short ingress telling which ADMB features are being used.
>>> People put models on their own web-pages, and post
>>> the ingress (containing and url) to the mailing list, where it is
>>>       
> picked
>   
>>> up by us (me) and posted on our web site. At a later stage
>>> the example can be fully uploaded to our website.
>>>
>>> Hans
>>>  
>>>
>>>  
>>>     
>>>       
>>>> -----Original Message-----
>>>> From: John Sibert [mailto:sibert at hawaii.edu]
>>>> Sent: Monday, December 07, 2009 5:50 PM
>>>> To: Hans Julius Skaug
>>>> Cc: developers at admb-project.org
>>>> Subject: Re: [Developers] Website: example collection
>>>>
>>>> Seems like a good idea to me (especially if Hans is willing to take
>>>>         
> on
>   
>>>> the job).
>>>>
>>>> Before creating yet another tab, though, it is worth
>>>> considering whether
>>>> the current organization of material is what we want. We are
>>>> creating a
>>>> new "look" for admb-project.org which should be available for
>>>> inspection
>>>> in a couple of weeks. It will eliminate the tabs (which many feel
>>>>         
> are
>   
>>>> rater clunky) in favor of a more conventional menu list on the
>>>> left. You
>>>> can see a preliminary version of the new site
>>>>
>>>>         
> http://www.soest.hawaii.edu/Illust/admb_dev/admb-project-template.htm
>   
>>>> (It has change a lot since this version, but the layout will be
>>>> similar.) So now is a good time to think about the
>>>> organization of stuff
>>>> on the site.
>>>>
>>>> John
>>>>
>>>> Hans Julius Skaug wrote:
>>>>    
>>>>       
>>>>         
>>>>> Hi All,
>>>>>
>>>>> Examples (with admb files) are scattered around the website,
>>>>>      
>>>>>         
>>>>>           
>>>> and are not
>>>>    
>>>>       
>>>>         
>>>>> very visible. This issue has been raised from time to time.
>>>>>
>>>>> What about creating an Examples tab at the top level (along
>>>>>      
>>>>>         
>>>>>           
>>>> with Documentation, Courses, etc)?
>>>>    
>>>>       
>>>>         
>>>>> Second: agree on some kind of taxonomy of models. Third:
>>>>>      
>>>>>         
>>>>>           
>>>> maintain a list of
>>>>    
>>>>       
>>>>         
>>>>> pointers to webpages where people put up their own models on
>>>>>      
>>>>>         
>>>>>           
>>>> their own webpages.
>>>>    
>>>>       
>>>>         
>>>>> If we agree, and the tab is created, then I will take on
>>>>>      
>>>>>         
>>>>>           
>>>> moving/organizing all the random effects examples.
>>>>    
>>>>       
>>>>         
>>>>> Hans
>>>>> _______________________________________________
>>>>> Developers mailing list
>>>>> Developers at admb-project.org
>>>>> http://lists.admb-project.org/mailman/listinfo/developers
>>>>>
>>>>>  
>>>>>      
>>>>>         
>>>>>           
>>>> --
>>>> John Sibert
>>>> Emeritus Researcher, SOEST
>>>> University of Hawaii at Manoa
>>>>
>>>> Visit the ADMB project http://admb-project.org/
>>>>
>>>>
>>>>    
>>>>       
>>>>         
>>>  
>>>     
>>>       
>> --
>> John Sibert
>> Emeritus Researcher, SOEST
>> University of Hawaii at Manoa
>>
>> Visit the ADMB project http://admb-project.org/
>>
>>
>>
>>
>>   
>>     
>
>   

-- 
John Sibert
Emeritus Researcher, SOEST
University of Hawaii at Manoa

Visit the ADMB project http://admb-project.org/



More information about the Developers mailing list