[ADMB Users] compiling ADMB | RHEL 5.5

[Evan Cooch]

As an attachment -- to you off-list, or to the list at large?

On 3/21/2011 3:37 PM, Johnoel Ancheta wrote:
> Can you send the config.log?
>
> On 3/20/11 7:24 AM, Evan Cooch wrote:
>> Greetings --
>>
>> I've been trying (without success) to compile ADMB (10.x) from source 
>> on a machine  running x86_64 RHEL (which, as many or you might know, 
>> uses gcc 4.1.2).  I'm hoping the solution isn't as simple as 'you 
>> have to have gcc 4.4.x to compile ADMB -- if so, then this lets out 
>> RHEL, CentOS, and Scientific Linux, all of whom stay far from the 
>> bleeding edge and use 4.1.x).
>>
>> So, here is what I've tried -- followed the basic instructions in the 
>> README file -- downloaded latest admb-10.0.zip. Extracted, then (from 
>> bash shell) run ./configure BUILD_64BIT=yes
>>
>>
>> While the screen dump didn't indicate any problems, looking deeper 
>> into the configure.log showed multiple 'issues'. First, picks up gcc fine
>>
>> configure:2117: checking for gcc
>> configure:2133: found /usr/bin/gcc
>> configure:2144: result: gcc
>> configure:2373: checking for C compiler version
>> configure:2382: gcc --version >&5
>> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-48)
>>
>>
>> First errors show up when looking at C++ preprocessor:
>>
>> configure:3128: checking how to run the C++ preprocessor
>> configure:3155: g++ -E  conftest.cpp
>> configure:3155: $? = 0
>> configure:3169: g++ -E  conftest.cpp
>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>> configure:3169: $? = 1
>> configure: failed program was:
>> | /* confdefs.h */
>> | #define PACKAGE_NAME "ADMB"
>> | #define PACKAGE_TARNAME "admb"
>> | #define PACKAGE_VERSION "10.0"
>> | #define PACKAGE_STRING "ADMB 10.0"
>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>> | #define PACKAGE_URL ""
>> | /* end confdefs.h.  */
>> | #include <ac_nonexistent.h>
>> configure:3194: result: g++ -E
>> configure:3214: g++ -E  conftest.cpp
>> configure:3214: $? = 0
>> configure:3228: g++ -E  conftest.cpp
>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>> configure:3228: $? = 1
>> configure: failed program was:
>> | /* confdefs.h */
>> | #define PACKAGE_NAME "ADMB"
>> | #define PACKAGE_TARNAME "admb"
>> | #define PACKAGE_VERSION "10.0"
>> | #define PACKAGE_STRING "ADMB 10.0"
>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>> | #define PACKAGE_URL ""
>> | /* end confdefs.h.  */
>>
>> and later on
>>
>> configure:3621: checking lex library
>> configure:3635: g++ -o conftest -g -O2   conftest.cpp >&5
>> conftest.l: In function 'int yylex()':
>> conftest.l:6: error: 'input' was not declared in this scope
>> configure:3635: $? = 1
>> configure: failed program was:
>> | /* confdefs.h */
>> | #define PACKAGE_NAME "ADMB"
>> | #define PACKAGE_TARNAME "admb"
>> | #define PACKAGE_VERSION "10.0"
>> | #define PACKAGE_STRING "ADMB 10.0"
>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>> | #define PACKAGE_URL ""
>> | #define STDC_HEADERS 1
>> | #define HAVE_SYS_TYPES_H 1
>> | #define HAVE_SYS_STAT_H 1
>> | #define HAVE_STDLIB_H 1
>> | #define HAVE_STRING_H 1
>> | #define HAVE_MEMORY_H 1
>> | #define HAVE_STRINGS_H 1
>> | #define HAVE_INTTYPES_H 1
>> | #define HAVE_STDINT_H 1
>> | #define HAVE_UNISTD_H 1
>> | #define HAVE_IOSTREAM 1
>> | /* end confdefs.h.  */
>> | /* A lexical scanner generated by flex*/
>> |
>> | /* Scanner skeleton version:
>> |  * $Header: /home/daffy/u0/vern/flex/RCS/flex.skl,v 2.91 96/09/10 
>> 16:58:48 vern Exp $
>> |  */
>>
>>
>> Tried a 32-bit build -- same errors.
>>
>> Now, I did proceed and try make, lots of warnings, but no outright 
>> fails. However, make install crashed and burned:
>>
>> install -d -m 555 /usr/local/admb/bin /usr/local/admb/include 
>> /usr/local/admb/lib /usr/local/admb/docs /usr/local/admb/examples
>> install -m 555 
>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/bin/* 
>> /usr/local/admb/bin
>> install -m 444 
>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/include/* 
>> /usr/local/admb/include
>> install -m 444 
>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/lib/* 
>> /usr/local/admb/lib
>> install -m 444 LICENSE /usr/local/admb
>> install -m 444 README.txt /usr/local/admb
>> install -m 444 Makefile /usr/local/admb
>> install -m 555 scripts/g++/admb-bin /usr/local/bin/admb
>> install: cannot stat `scripts/g++/admb-bin': No such file or directory
>> make: *** [install] Error 1
>>
>>
>> At this point, I'll take any and all suggestions, no matter how 
>> trivial (save for installing gcc 4.4.x).
>>
>>
>>
>>
>>
>> _______________________________________________
>> Users mailing list
>> Users at admb-project.org
>> http://lists.admb-project.org/mailman/listinfo/users
>
>
> _______________________________________________
> Users mailing list
> Users at admb-project.org
> http://lists.admb-project.org/mailman/listinfo/users
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.admb-project.org/pipermail/users/attachments/20110321/9abed064/attachment.html>