[ADMB Users] compiling ADMB | RHEL 5.5

[aaron]

Hum this is really interesting.
What were the warnings? It looks like the 32bit compile worked ok...
except that make  looked for admb-bin in the wrong directory.  This 
could have been fixed recently.
The configure log would be good to see.

Aaron




On 03/21/2011 01:18 PM, Evan Cooch wrote:
> As an attachment -- to you off-list, or to the list at large?
>
> On 3/21/2011 3:37 PM, Johnoel Ancheta wrote:
>> Can you send the config.log?
>>
>> On 3/20/11 7:24 AM, Evan Cooch wrote:
>>> Greetings --
>>>
>>> I've been trying (without success) to compile ADMB (10.x) from 
>>> source on a machine  running x86_64 RHEL (which, as many or you 
>>> might know, uses gcc 4.1.2).  I'm hoping the solution isn't as 
>>> simple as 'you have to have gcc 4.4.x to compile ADMB -- if so, then 
>>> this lets out RHEL, CentOS, and Scientific Linux, all of whom stay 
>>> far from the bleeding edge and use 4.1.x).
>>>
>>> So, here is what I've tried -- followed the basic instructions in 
>>> the README file -- downloaded latest admb-10.0.zip. Extracted, then 
>>> (from bash shell) run ./configure BUILD_64BIT=yes
>>>
>>>
>>> While the screen dump didn't indicate any problems, looking deeper 
>>> into the configure.log showed multiple 'issues'. First, picks up gcc 
>>> fine
>>>
>>> configure:2117: checking for gcc
>>> configure:2133: found /usr/bin/gcc
>>> configure:2144: result: gcc
>>> configure:2373: checking for C compiler version
>>> configure:2382: gcc --version >&5
>>> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-48)
>>>
>>>
>>> First errors show up when looking at C++ preprocessor:
>>>
>>> configure:3128: checking how to run the C++ preprocessor
>>> configure:3155: g++ -E  conftest.cpp
>>> configure:3155: $? = 0
>>> configure:3169: g++ -E  conftest.cpp
>>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>>> configure:3169: $? = 1
>>> configure: failed program was:
>>> | /* confdefs.h */
>>> | #define PACKAGE_NAME "ADMB"
>>> | #define PACKAGE_TARNAME "admb"
>>> | #define PACKAGE_VERSION "10.0"
>>> | #define PACKAGE_STRING "ADMB 10.0"
>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>> | #define PACKAGE_URL ""
>>> | /* end confdefs.h.  */
>>> | #include <ac_nonexistent.h>
>>> configure:3194: result: g++ -E
>>> configure:3214: g++ -E  conftest.cpp
>>> configure:3214: $? = 0
>>> configure:3228: g++ -E  conftest.cpp
>>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>>> configure:3228: $? = 1
>>> configure: failed program was:
>>> | /* confdefs.h */
>>> | #define PACKAGE_NAME "ADMB"
>>> | #define PACKAGE_TARNAME "admb"
>>> | #define PACKAGE_VERSION "10.0"
>>> | #define PACKAGE_STRING "ADMB 10.0"
>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>> | #define PACKAGE_URL ""
>>> | /* end confdefs.h.  */
>>>
>>> and later on
>>>
>>> configure:3621: checking lex library
>>> configure:3635: g++ -o conftest -g -O2   conftest.cpp >&5
>>> conftest.l: In function 'int yylex()':
>>> conftest.l:6: error: 'input' was not declared in this scope
>>> configure:3635: $? = 1
>>> configure: failed program was:
>>> | /* confdefs.h */
>>> | #define PACKAGE_NAME "ADMB"
>>> | #define PACKAGE_TARNAME "admb"
>>> | #define PACKAGE_VERSION "10.0"
>>> | #define PACKAGE_STRING "ADMB 10.0"
>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>> | #define PACKAGE_URL ""
>>> | #define STDC_HEADERS 1
>>> | #define HAVE_SYS_TYPES_H 1
>>> | #define HAVE_SYS_STAT_H 1
>>> | #define HAVE_STDLIB_H 1
>>> | #define HAVE_STRING_H 1
>>> | #define HAVE_MEMORY_H 1
>>> | #define HAVE_STRINGS_H 1
>>> | #define HAVE_INTTYPES_H 1
>>> | #define HAVE_STDINT_H 1
>>> | #define HAVE_UNISTD_H 1
>>> | #define HAVE_IOSTREAM 1
>>> | /* end confdefs.h.  */
>>> | /* A lexical scanner generated by flex*/
>>> |
>>> | /* Scanner skeleton version:
>>> |  * $Header: /home/daffy/u0/vern/flex/RCS/flex.skl,v 2.91 96/09/10 
>>> 16:58:48 vern Exp $
>>> |  */
>>>
>>>
>>> Tried a 32-bit build -- same errors.
>>>
>>> Now, I did proceed and try make, lots of warnings, but no outright 
>>> fails. However, make install crashed and burned:
>>>
>>> install -d -m 555 /usr/local/admb/bin /usr/local/admb/include 
>>> /usr/local/admb/lib /usr/local/admb/docs /usr/local/admb/examples
>>> install -m 555 
>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/bin/* 
>>> /usr/local/admb/bin
>>> install -m 444 
>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/include/* 
>>> /usr/local/admb/include
>>> install -m 444 
>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/lib/* 
>>> /usr/local/admb/lib
>>> install -m 444 LICENSE /usr/local/admb
>>> install -m 444 README.txt /usr/local/admb
>>> install -m 444 Makefile /usr/local/admb
>>> install -m 555 scripts/g++/admb-bin /usr/local/bin/admb
>>> install: cannot stat `scripts/g++/admb-bin': No such file or directory
>>> make: *** [install] Error 1
>>>
>>>
>>> At this point, I'll take any and all suggestions, no matter how 
>>> trivial (save for installing gcc 4.4.x).
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Users mailing list
>>> Users at admb-project.org
>>> http://lists.admb-project.org/mailman/listinfo/users
>>
>>
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>
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