[ADMB Users] compiling ADMB | RHEL 5.5

Mon Mar 21 14:16:31 PDT 2011

Yes, it was fixed, but not yet released.  After running configure,
edit the generated GNUmakefile.  Locate the line

install -m 555 scripts/g++/admb-bin /usr/local/bin/admb

and change to

install -m 555 scripts/*admb*/admb-bin /usr/local/bin/admb

then

$ make install.

An easier approach would be to just copy the distribution folder
build/admb-*/admb-* to your home folder, then set ADMB_HOME
to that.

On 3/21/11 11:07 AM, aaron wrote:
> Hum this is really interesting.
> What were the warnings? It looks like the 32bit compile worked ok...
> except that make  looked for admb-bin in the wrong directory.  This 
> could have been fixed recently.
> The configure log would be good to see.
>
> Aaron
>
>
>
>
> On 03/21/2011 01:18 PM, Evan Cooch wrote:
>> As an attachment -- to you off-list, or to the list at large?
>>
>> On 3/21/2011 3:37 PM, Johnoel Ancheta wrote:
>>> Can you send the config.log?
>>>
>>> On 3/20/11 7:24 AM, Evan Cooch wrote:
>>>> Greetings --
>>>>
>>>> I've been trying (without success) to compile ADMB (10.x) from 
>>>> source on a machine  running x86_64 RHEL (which, as many or you 
>>>> might know, uses gcc 4.1.2).  I'm hoping the solution isn't as 
>>>> simple as 'you have to have gcc 4.4.x to compile ADMB -- if so, 
>>>> then this lets out RHEL, CentOS, and Scientific Linux, all of whom 
>>>> stay far from the bleeding edge and use 4.1.x).
>>>>
>>>> So, here is what I've tried -- followed the basic instructions in 
>>>> the README file -- downloaded latest admb-10.0.zip. Extracted, then 
>>>> (from bash shell) run ./configure BUILD_64BIT=yes
>>>>
>>>>
>>>> While the screen dump didn't indicate any problems, looking deeper 
>>>> into the configure.log showed multiple 'issues'. First, picks up 
>>>> gcc fine
>>>>
>>>> configure:2117: checking for gcc
>>>> configure:2133: found /usr/bin/gcc
>>>> configure:2144: result: gcc
>>>> configure:2373: checking for C compiler version
>>>> configure:2382: gcc --version >&5
>>>> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-48)
>>>>
>>>>
>>>> First errors show up when looking at C++ preprocessor:
>>>>
>>>> configure:3128: checking how to run the C++ preprocessor
>>>> configure:3155: g++ -E  conftest.cpp
>>>> configure:3155: $? = 0
>>>> configure:3169: g++ -E  conftest.cpp
>>>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>>>> configure:3169: $? = 1
>>>> configure: failed program was:
>>>> | /* confdefs.h */
>>>> | #define PACKAGE_NAME "ADMB"
>>>> | #define PACKAGE_TARNAME "admb"
>>>> | #define PACKAGE_VERSION "10.0"
>>>> | #define PACKAGE_STRING "ADMB 10.0"
>>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>>> | #define PACKAGE_URL ""
>>>> | /* end confdefs.h.  */
>>>> | #include <ac_nonexistent.h>
>>>> configure:3194: result: g++ -E
>>>> configure:3214: g++ -E  conftest.cpp
>>>> configure:3214: $? = 0
>>>> configure:3228: g++ -E  conftest.cpp
>>>> conftest.cpp:9:28: error: ac_nonexistent.h: No such file or directory
>>>> configure:3228: $? = 1
>>>> configure: failed program was:
>>>> | /* confdefs.h */
>>>> | #define PACKAGE_NAME "ADMB"
>>>> | #define PACKAGE_TARNAME "admb"
>>>> | #define PACKAGE_VERSION "10.0"
>>>> | #define PACKAGE_STRING "ADMB 10.0"
>>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>>> | #define PACKAGE_URL ""
>>>> | /* end confdefs.h.  */
>>>>
>>>> and later on
>>>>
>>>> configure:3621: checking lex library
>>>> configure:3635: g++ -o conftest -g -O2   conftest.cpp >&5
>>>> conftest.l: In function 'int yylex()':
>>>> conftest.l:6: error: 'input' was not declared in this scope
>>>> configure:3635: $? = 1
>>>> configure: failed program was:
>>>> | /* confdefs.h */
>>>> | #define PACKAGE_NAME "ADMB"
>>>> | #define PACKAGE_TARNAME "admb"
>>>> | #define PACKAGE_VERSION "10.0"
>>>> | #define PACKAGE_STRING "ADMB 10.0"
>>>> | #define PACKAGE_BUGREPORT "users at admb-project.org"
>>>> | #define PACKAGE_URL ""
>>>> | #define STDC_HEADERS 1
>>>> | #define HAVE_SYS_TYPES_H 1
>>>> | #define HAVE_SYS_STAT_H 1
>>>> | #define HAVE_STDLIB_H 1
>>>> | #define HAVE_STRING_H 1
>>>> | #define HAVE_MEMORY_H 1
>>>> | #define HAVE_STRINGS_H 1
>>>> | #define HAVE_INTTYPES_H 1
>>>> | #define HAVE_STDINT_H 1
>>>> | #define HAVE_UNISTD_H 1
>>>> | #define HAVE_IOSTREAM 1
>>>> | /* end confdefs.h.  */
>>>> | /* A lexical scanner generated by flex*/
>>>> |
>>>> | /* Scanner skeleton version:
>>>> |  * $Header: /home/daffy/u0/vern/flex/RCS/flex.skl,v 2.91 96/09/10 
>>>> 16:58:48 vern Exp $
>>>> |  */
>>>>
>>>>
>>>> Tried a 32-bit build -- same errors.
>>>>
>>>> Now, I did proceed and try make, lots of warnings, but no outright 
>>>> fails. However, make install crashed and burned:
>>>>
>>>> install -d -m 555 /usr/local/admb/bin /usr/local/admb/include 
>>>> /usr/local/admb/lib /usr/local/admb/docs /usr/local/admb/examples
>>>> install -m 555 
>>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/bin/* 
>>>> /usr/local/admb/bin
>>>> install -m 444 
>>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/include/* 
>>>> /usr/local/admb/include
>>>> install -m 444 
>>>> build/admb-10.0-linux-gcc4.1.2-64bit/admb-10.0-linux-gcc4.1.2-64bit/lib/* 
>>>> /usr/local/admb/lib
>>>> install -m 444 LICENSE /usr/local/admb
>>>> install -m 444 README.txt /usr/local/admb
>>>> install -m 444 Makefile /usr/local/admb
>>>> install -m 555 scripts/g++/admb-bin /usr/local/bin/admb
>>>> install: cannot stat `scripts/g++/admb-bin': No such file or directory
>>>> make: *** [install] Error 1
>>>>
>>>>
>>>> At this point, I'll take any and all suggestions, no matter how 
>>>> trivial (save for installing gcc 4.4.x).
>>>>
>>>>
>>>>
>>>>
>>>>
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>>>
>>>
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>>
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