[ADMB Users] Example submission

[Jeff Laake]

Here is an example for the mark-recapture section of examples.

Title:Fitting Cormack-Jolly-Seber Models to Capture-Recapture Data with
ADMB and R2admb

url to pdf:
https://github.com/downloads/jlaake/ADMB-Examples/CJSFixedEffects.pdf

url to ADMB files:
https://github.com/jlaake/ADMB-Examples/tree/master/Fixed%20Effect%20CJS

Abstract: This example provides a template to fit any fixed effects CJS
model to capture-recapture data.  This template and code to create the .DAT
file are used in the R package marked (https://github.com/jlaake/marked)
when use.admb is TRUE. The pdf shows an example with the dipper data that
is also analyzed with MARK (http://www.phidot.org/software/mark/)  through
the RMark package (*cran*.r-project.org/web/packages/*RMark*/index.html) to
show that the same results are obtained.

A mixed-effects CJS template will follow at some point.  See
https://github.com/jlaake/ADMB-Examples/tree/master/Individual%20Heterogeneity%20CJS
for
a work in progress that allows individual heterogeneity only.
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